SLC44A5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC44A5 mutation is significantly associated with the total protein of many other genes, with 59 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC44A5-associated genes across cancer lineages are MSH6, FOXO3a_pS318_S321, and Dvl3. Each is linked with SLC44A5 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC44A5-to-partner and partner-to-SLC44A5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MSH6 grouped by SLC44A5-low versus SLC44A5-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC44A5→partner) and Y-score (partner→SLC44A5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCMSH6 →+0.471+3.331.014.00532
LUADFOXO3a_pS318_S321 →-0.112-3.584.021.00232
LUADDvl3 →+0.208+2.476.004.01123
UCEC14-3-3_beta →-0.069-1.973.039.02932
UCECeIF4E →+0.208+3.820.003<.00132
UCECeIF4G →+0.266+2.222.010.01032
Each partner links to its Q-omics profile. Showing the 6 strongest of 59 associations by consensus.

MSH6 by SLC44A5 expression — LUSC

Box plot of MSH6 in SLC44A5-low vs SLC44A5-high samples in LUSC.

Explore this box plot interactively →

Exploration