SLC44A3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC44A3 protein abundance is significantly associated with the RNA expression of many other genes, with 6,792 significant associations in total. OV shows the largest number of these associations.

The most reproducible SLC44A3-associated genes across cancer lineages are NUF2, SKA3, and ANLN. Each is linked with SLC44A3 in more than 3 cancer types. Because this analysis shows association rather than direction, both SLC44A3-to-partner and partner-to-SLC44A3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC44A3 versus NUF2 in BRCA, with a Pearson correlation of -0.78.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC44A3→partner) and Y-score (partner→SLC44A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCANUF2 →-1.293-1.376.007.00524
BRCASKA3 →-1.250-1.223<.001.00624
LUADANLN →-0.951-0.294.001.00233
LSCCKIF18A →-0.931-0.371<.001.00233
LUADHJURP →-0.808-0.259.002.00733
UCECC4BPB →+1.275+0.593<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,792 associations by consensus.

SLC44A3 vs NUF2 — BRCA

Per-sample scatter of SLC44A3 vs NUF2 in BRCA (Pearson r = -0.78).

Explore this scatter interactively →

Exploration