SLC39A7

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC39A7 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLC39A7-associated genes across cancer lineages are CCDC195, OR4S2, and IQCF5. Each is linked with SLC39A7 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC39A7-to-partner and partner-to-SLC39A7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCDC195 grouped by SLC39A7-low versus SLC39A7-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC39A7→partner) and Y-score (partner→SLC39A7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINECCDC195 →+0.044+4.467.003.00431
STOMACHOR4S2 →+0.020+5.285<.001.00331
BLOOD_LeukemiaIQCF5 →+0.124+5.201<.001.00631
BLOOD_LeukemiaC6 →+0.201+4.922<.001.00931
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

CCDC195 by SLC39A7 expression — LARGE_INTESTINE

Box plot of CCDC195 in SLC39A7-low vs SLC39A7-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration