SLC39A13

Across TCGA cell cohorts, SLC39A13 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,855 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SLC39A13-associated GO terms across cancer lineages are Regulation of protein K48-linked ubiquitination, Golgi to plasma membrane protein transport, and Positive regulation of stress fiber assembly. Each is linked with SLC39A13 in more than 15 cancer types. Because this analysis shows association rather than direction, both SLC39A13-to-partner and partner-to-SLC39A13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of protein K48-linked ubiquitination grouped by SLC39A13-low versus SLC39A13-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC39A13→partner) and Y-score (partner→SLC39A13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	Regulation of protein K48-linked ubiquitination →	+0.245	+1.817	<.001	<.001	3	16
LUNG_NSCLC_LUSC	Golgi to plasma membrane protein transport →	+0.181	+2.097	<.001	<.001	3	16
BONE	Positive regulation of stress fiber assembly →	+0.159	+0.977	<.001	<.001	3	15
LIVER	Actin filament depolymerization →	+0.223	+1.378	<.001	<.001	3	15
LIVER	Negative regulation of small GTPase mediated signal transduction →	+0.108	+1.372	.001	<.001	3	14
BONE	Positive regulation of focal adhesion assembly →	+0.226	+1.129	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,855 associations by consensus.

Regulation of protein K48-linked ubiquitination by SLC39A13 expression — UPPER_AERODIGESTIVE_TRACT

Explore this box plot interactively →