SLC38A3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC38A3 protein abundance is significantly associated with the RNA expression of many other genes, with 2,332 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC38A3-associated genes across cancer lineages are SLC29A2, TAAR3P, and CLEC6A. Each is linked with SLC38A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC38A3-to-partner and partner-to-SLC38A3 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC38A3→partner) and Y-score (partner→SLC38A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSLC29A2 →+1.120+0.740<.001<.00132
GBMTAAR3P →+0.847+0.542.003.00132
PDACCLEC6A →-1.078-0.740.002<.00132
PDACESRRAP1 →+0.320+0.740.001<.00132
PDACHNRNPA1P9 →+0.624+0.740<.001<.00132
GBMANP32AP1 →+0.435+0.562.005.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,332 associations by consensus.

Exploration