SLC38A2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC38A2 protein abundance is significantly associated with the RNA expression of many other genes, with 16,585 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible SLC38A2-associated genes across cancer lineages are GNG7, ANKAR, and ZBTB18. Each is linked with SLC38A2 in more than 5 cancer types. Because this analysis shows association rather than direction, both SLC38A2-to-partner and partner-to-SLC38A2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC38A2 versus GNG7 in OV, with a Pearson correlation of -0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC38A2→partner) and Y-score (partner→SLC38A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVGNG7 →-0.892-0.678.001<.00136
LUADANKAR →-0.610-0.751<.001<.00135
BRCAZBTB18 →-1.420-0.532<.001<.00135
PDACACSM5 →-0.638-0.528<.001<.00135
HNSCZNF546 →-0.697-0.772<.001<.00135
LUADORAOV1P1 →-0.936-0.534<.001.00235
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,585 associations by consensus.

SLC38A2 vs GNG7 — OV

Per-sample scatter of SLC38A2 vs GNG7 in OV (Pearson r = -0.35).

Explore this scatter interactively →

Exploration