SLC38A10

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC38A10 mutation is significantly associated with the RNA expression of many other genes, with 1,891 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC38A10-associated genes across cancer lineages are JAKMIP1, RRM1, and TIMM21. Each is linked with SLC38A10 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC38A10-to-partner and partner-to-SLC38A10 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, JAKMIP1 grouped by SLC38A10-low versus SLC38A10-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC38A10→partner) and Y-score (partner→SLC38A10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECJAKMIP1 →+0.454+4.021<.001<.00133
UCECRRM1 →+0.499+1.347.004.00733
UCECTIMM21 →+0.330+1.546.004.00133
COADGOLGA3 →+0.507+3.210.002.00933
UCECCDC6 →+0.522+1.627.001.00433
UCECIL21R →+0.477+3.031<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,891 associations by consensus.

JAKMIP1 by SLC38A10 expression — UCEC

Box plot of JAKMIP1 in SLC38A10-low vs SLC38A10-high samples in UCEC.

Explore this box plot interactively →

Exploration