SLC35G6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC35G6 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC35G6-associated genes across cancer lineages are TRARG1 and LRRC3C. Each is linked with SLC35G6 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC35G6-to-partner and partner-to-SLC35G6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRARG1 grouped by SLC35G6-low versus SLC35G6-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35G6→partner) and Y-score (partner→SLC35G6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINETRARG1 →+0.022+3.345<.001.00731
LARGE_INTESTINELRRC3C →+0.289+3.658<.001.00531
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

TRARG1 by SLC35G6 expression — LARGE_INTESTINE

Box plot of TRARG1 in SLC35G6-low vs SLC35G6-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration