SLC35G3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35G3 mutation is significantly associated with the RNA expression of many other genes, with 3,112 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC35G3-associated genes across cancer lineages are BCAR1P2, RNU2-28P, and H3C5P. Each is linked with SLC35G3 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC35G3-to-partner and partner-to-SLC35G3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, BCAR1P2 grouped by SLC35G3-low versus SLC35G3-high in LIHC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35G3→partner) and Y-score (partner→SLC35G3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIHCBCAR1P2 →+0.080+6.149<.001.00233
COADRNU2-28P →+0.613+3.515<.001.00533
SKCMH3C5P →+0.153+2.030<.001.00933
LUADMAPK6P6 →+0.041+2.679.009.00733
LUSCSNORD116-13 →+0.470+3.417.002.00133
SKCMMFAP3 →+0.740+3.331.004.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,112 associations by consensus.

BCAR1P2 by SLC35G3 expression — LIHC

Box plot of BCAR1P2 in SLC35G3-low vs SLC35G3-high samples in LIHC.

Explore this box plot interactively →

Exploration