SLC35F4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35F4 mutation is significantly associated with the total protein of many other genes, with 32 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC35F4-associated genes across cancer lineages are Caspase-7-cleavedD198, 4E-BP1, and Di-Ras3. Each is linked with SLC35F4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC35F4-to-partner and partner-to-SLC35F4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by SLC35F4-low versus SLC35F4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35F4→partner) and Y-score (partner→SLC35F4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.510+3.341.022.00532
UCEC4E-BP1 →+0.311+3.489.002.00232
UCECDi-Ras3 →-0.140-3.308.012.00932
LUSCRb_pS807_S811 →+0.682+2.816.004.03631
SKCMIRS1 →+0.238+1.906<.001.01431
SKCMMyosin-IIa_pS1943 →-0.309-1.397.003.04531
Each partner links to its Q-omics profile. Showing the 6 strongest of 32 associations by consensus.

Caspase-7-cleavedD198 by SLC35F4 expression — UCEC

Box plot of Caspase-7-cleavedD198 in SLC35F4-low vs SLC35F4-high samples in UCEC.

Explore this box plot interactively →

Exploration