SLC35A4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC35A4 mutation is significantly associated with the total protein of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC35A4-associated genes across cancer lineages are Notch1, 14-3-3_beta, and A-Raf_pS299. Each is linked with SLC35A4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC35A4-to-partner and partner-to-SLC35A4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Notch1 grouped by SLC35A4-low versus SLC35A4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35A4→partner) and Y-score (partner→SLC35A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNotch1 →+0.114+1.584.040.03632
UCEC14-3-3_beta →-0.107-2.295.006.03331
UCECA-Raf_pS299 →-0.219-3.700<.001.00131
UCECFibronectin →-0.256-2.502.048.00231
UCECFoxM1 →+0.205+1.584.043.03631
UCECFOXO3a_pS318_S321 →-0.102-2.105.037.01731
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

Notch1 by SLC35A4 expression — UCEC

Box plot of Notch1 in SLC35A4-low vs SLC35A4-high samples in UCEC.

Explore this box plot interactively →

Exploration