SLC35A4

Across TCGA cell cohorts, SLC35A4 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. CNS shows the largest number of these associations.

The most reproducible SLC35A4-associated genes across cancer lineages are CCL1, TEX55, and ACSM6. Each is linked with SLC35A4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC35A4-to-partner and partner-to-SLC35A4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCL1 grouped by SLC35A4-low versus SLC35A4-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC35A4→partner) and Y-score (partner→SLC35A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CNS	CCL1 →	+0.427	+4.472	<.001	.004	3	1
CNS	TEX55 →	+0.037	+4.321	<.001	.009	3	1
LARGE_INTESTINE	ACSM6 →	+0.027	+4.169	<.001	.007	3	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

CCL1 by SLC35A4 expression — CNS

Explore this box plot interactively →