SLC33A1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC33A1 mutation is significantly associated with the RNA expression of many other genes, with 2,623 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC33A1-associated genes across cancer lineages are E2F6P1, LARP1, and STOML2. Each is linked with SLC33A1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC33A1-to-partner and partner-to-SLC33A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, E2F6P1 grouped by SLC33A1-low versus SLC33A1-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC33A1→partner) and Y-score (partner→SLC33A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCME2F6P1 →+0.023+3.179<.001.00733
UCECLARP1 →+0.430+2.455.001.00132
UCECSTOML2 →+0.419+2.542.002<.00132
UCECMELK →+0.772+3.010<.001<.00132
UCECLMNB2 →+0.721+3.643<.001<.00132
UCECNLE1 →+0.547+2.534<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,623 associations by consensus.

E2F6P1 by SLC33A1 expression — SKCM

Box plot of E2F6P1 in SLC33A1-low vs SLC33A1-high samples in SKCM.

Explore this box plot interactively →

Exploration