SLC32A1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC32A1 protein abundance is significantly associated with the RNA expression of many other genes, with 13,604 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC32A1-associated genes across cancer lineages are YPEL1, SNRPD3, and PRODH. Each is linked with SLC32A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC32A1-to-partner and partner-to-SLC32A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC32A1 versus YPEL1 in GBM, with a Pearson correlation of 0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC32A1→partner) and Y-score (partner→SLC32A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMYPEL1 →+0.381+0.738.004<.00131
GBMSNRPD3 →+0.384+1.020.004.00231
GBMPRODH →+0.703+0.844<.001<.00131
GBMGRK3 →+0.454+0.865.002.00231
GBMSEZ6L →+1.452+0.947<.001<.00131
GBMLGALS1 →-0.791-1.002<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,604 associations by consensus.

SLC32A1 vs YPEL1 — GBM

Per-sample scatter of SLC32A1 vs YPEL1 in GBM (Pearson r = 0.29).

Explore this scatter interactively →

Exploration