SLC30A9

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC30A9 mutation is significantly associated with the RNA expression of many other genes, with 19 significant associations in total. OVARY shows the largest number of these associations.

The most reproducible SLC30A9-associated genes across cancer lineages are MYF5, OR2M4, and OR2AJ1. Each is linked with SLC30A9 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC30A9-to-partner and partner-to-SLC30A9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MYF5 grouped by SLC30A9-low versus SLC30A9-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC30A9→partner) and Y-score (partner→SLC30A9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYMYF5 →+0.017+4.807<.001.00331
OVARYOR2M4 →+0.108+4.700<.001.00231
OVARYOR2AJ1 →+0.057+4.029<.001.00931
OVARYC12orf40 →+0.011+4.029<.001.00931
OVARYOR2AK2 →+0.078+4.029<.001.00931
OVARYOR2H1 →+0.027+4.029<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

MYF5 by SLC30A9 expression — OVARY

Box plot of MYF5 in SLC30A9-low vs SLC30A9-high samples in OVARY.

Explore this box plot interactively →

Exploration