SLC2A4RG

Across TCGA patient cohorts, SLC2A4RG mutation is significantly associated with the RNA expression of many other genes, with 889 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC2A4RG-associated genes across cancer lineages are RNU6-213P, RNVU1-17, and MIR548C. Each is linked with SLC2A4RG in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC2A4RG-to-partner and partner-to-SLC2A4RG results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-213P grouped by SLC2A4RG-low versus SLC2A4RG-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC2A4RG→partner) and Y-score (partner→SLC2A4RG) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	RNU6-213P →	+0.354	+4.072	.008	.005	3	1
SKCM	RNVU1-17 →	+0.140	+4.385	<.001	.008	3	1
SKCM	MIR548C →	+0.419	+4.656	<.001	.001	3	1
SKCM	RNU6-308P →	+0.390	+4.302	<.001	.002	3	1
SKCM	RNU6-192P →	+0.294	+5.634	<.001	.001	3	1
SKCM	TAF9BP2 →	+0.101	+5.180	.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 889 associations by consensus.

RNU6-213P by SLC2A4RG expression — SKCM

Explore this box plot interactively →