SLC29A3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC29A3 mutation is significantly associated with the RNA expression of many other genes, with 992 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SLC29A3-associated genes across cancer lineages are SQSTM1P1, CDK4P1, and LINC00333. Each is linked with SLC29A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC29A3-to-partner and partner-to-SLC29A3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC29A3→partner) and Y-score (partner→SLC29A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSQSTM1P1 →+0.040+2.105.008.00832
LUADCDK4P1 →+0.057+6.197<.001.00132
LUADLINC00333 →+0.110+5.217<.001.00732
LUADTXNP3 →+0.195+5.217<.001.00732
COADRNU6-709P →+0.592+5.557<.001.00132
UCECMTRF1 →+0.334+3.475.004.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 992 associations by consensus.

Exploration