SLC29A1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC29A1 protein abundance is significantly associated with the RNA expression of many other genes, with 10,654 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC29A1-associated genes across cancer lineages are SLPI, SERPINA1, and RNASEH2A. Each is linked with SLC29A1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC29A1-to-partner and partner-to-SLC29A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC29A1 versus SLPI in UCEC, with a Pearson correlation of -0.48.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC29A1→partner) and Y-score (partner→SLC29A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSLPI →-2.639-0.673<.001<.00133
LSCCSERPINA1 →-1.720-1.133<.001.00133
UCECRNASEH2A →+0.467+0.528.008<.00132
LSCCPCGF6 →+0.468+0.929.009.00432
LSCCDHX57 →+0.653+1.389<.001<.00132
LSCCNDUFAF2 →+0.528+1.108.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,654 associations by consensus.

SLC29A1 vs SLPI — UCEC

Per-sample scatter of SLC29A1 vs SLPI in UCEC (Pearson r = -0.48).

Explore this scatter interactively →

Exploration