SLC29A1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC29A1 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. OVARY shows the largest number of these associations.

The most reproducible SLC29A1-associated genes across cancer lineages are DAZ2 and CT47A6. Each is linked with SLC29A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC29A1-to-partner and partner-to-SLC29A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DAZ2 grouped by SLC29A1-low versus SLC29A1-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC29A1→partner) and Y-score (partner→SLC29A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYDAZ2 →+0.106+5.807<.001.00131
OVARYCT47A6 →+0.030+5.807<.001.00131
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

DAZ2 by SLC29A1 expression — OVARY

Box plot of DAZ2 in SLC29A1-low vs SLC29A1-high samples in OVARY.

Explore this box plot interactively →

Exploration