SLC25A43

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC25A43 mutation is significantly associated with the RNA expression of many other genes, with 1,236 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC25A43-associated genes across cancer lineages are RNA5SP422, RN7SKP2, and RNA5SP76. Each is linked with SLC25A43 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC25A43-to-partner and partner-to-SLC25A43 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP422 grouped by SLC25A43-low versus SLC25A43-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC25A43→partner) and Y-score (partner→SLC25A43) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP422 →+0.602+2.086.001.00232
SKCMRN7SKP2 →+0.183+4.993<.001.00232
BRCARNA5SP76 →+0.585+7.731<.001.00931
SKCMFKBP4P2 →+0.040+5.622<.001<.00131
SKCMDPRXP7 →+0.085+5.993<.001.00131
SKCMGGTLC3 →+0.143+4.838<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,236 associations by consensus.

RNA5SP422 by SLC25A43 expression — UCEC

Box plot of RNA5SP422 in SLC25A43-low vs SLC25A43-high samples in UCEC.

Explore this box plot interactively →

Exploration