SLC25A40

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC25A40 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. KIDNEY shows the largest number of these associations.

The most reproducible SLC25A40-associated genes across cancer lineages are NPVF, TCF23, and FAM216B. Each is linked with SLC25A40 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC25A40-to-partner and partner-to-SLC25A40 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NPVF grouped by SLC25A40-low versus SLC25A40-high in KIDNEY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC25A40→partner) and Y-score (partner→SLC25A40) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYNPVF →+0.020+5.000<.001.00531
KIDNEYTCF23 →+0.006+5.000<.001.00531
KIDNEYFAM216B →+0.103+5.000<.001.00531
KIDNEYGLYATL3 →+0.043+5.000<.001.00531
KIDNEYKIR2DL3 →+0.013+5.000<.001.00531
KIDNEYKLF18 →+0.006+5.000<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

NPVF by SLC25A40 expression — KIDNEY

Box plot of NPVF in SLC25A40-low vs SLC25A40-high samples in KIDNEY.

Explore this box plot interactively →

Exploration