SLC25A34

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC25A34 mutation is significantly associated with the RNA expression of many other genes, with 114 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC25A34-associated genes across cancer lineages are MIR588, RBPJP5, and RBAK-RBAKDN. Each is linked with SLC25A34 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC25A34-to-partner and partner-to-SLC25A34 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR588 grouped by SLC25A34-low versus SLC25A34-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC25A34→partner) and Y-score (partner→SLC25A34) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMIR588 →+0.325+4.743<.001.00532
SKCMRBPJP5 →+0.041+6.225<.001<.00132
UCECRBAK-RBAKDN →+0.147+2.627<.001.00531
UCECINO80B-WBP1 →+0.130+3.477<.001.00631
COADRNU6-694P →+0.254+4.308.003.00931
COADCOMMD4P2 →+0.164+4.942<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 114 associations by consensus.

MIR588 by SLC25A34 expression — SKCM

Box plot of MIR588 in SLC25A34-low vs SLC25A34-high samples in SKCM.

Explore this box plot interactively →

Exploration