SLC25A16

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC25A16 mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC25A16-associated genes across cancer lineages are CST8, LHCGR, and VCX2. Each is linked with SLC25A16 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC25A16-to-partner and partner-to-SLC25A16 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CST8 grouped by SLC25A16-low versus SLC25A16-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC25A16→partner) and Y-score (partner→SLC25A16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINECST8 →+0.021+4.415<.001.00731
LARGE_INTESTINELHCGR →+0.063+4.467<.001.00431
LARGE_INTESTINEVCX2 →+1.507+4.415<.001.00731
LARGE_INTESTINEFIGLA →+0.037+4.415<.001.00731
LARGE_INTESTINEDEFB132 →+0.074+4.415<.001.00731
LARGE_INTESTINEFAM205C →+0.015+5.022<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

CST8 by SLC25A16 expression — LARGE_INTESTINE

Box plot of CST8 in SLC25A16-low vs SLC25A16-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration