SLC24A4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC24A4 protein abundance is significantly associated with the RNA expression of many other genes, with 607 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC24A4-associated genes across cancer lineages are TLR1, APCDD1L, and YPEL1. Each is linked with SLC24A4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC24A4-to-partner and partner-to-SLC24A4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC24A4 versus TLR1 in UCEC, with a Pearson correlation of -0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC24A4→partner) and Y-score (partner→SLC24A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTLR1 →-1.130-0.758.004.00532
GBMAPCDD1L →+0.812+0.529.007<.00132
UCECYPEL1 →+1.365+1.052.003.00531
UCECRAB3A →+1.038+0.768.001.00431
UCECDNM1 →+0.963+0.768.007.00431
UCECCTSC →-1.076-0.735.006.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 607 associations by consensus.

SLC24A4 vs TLR1 — UCEC

Per-sample scatter of SLC24A4 vs TLR1 in UCEC (Pearson r = -0.61).

Explore this scatter interactively →

Exploration