SLC23A2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC23A2 mutation is significantly associated with the RNA expression of many other genes, with 178 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC23A2-associated genes across cancer lineages are OR2B2, EDDM3B, and PPP1R2C. Each is linked with SLC23A2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC23A2-to-partner and partner-to-SLC23A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR2B2 grouped by SLC23A2-low versus SLC23A2-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC23A2→partner) and Y-score (partner→SLC23A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOR2B2 →+0.027+4.684<.001.00231
SKINEDDM3B →+0.029+4.415<.001.00731
BLOOD_LeukemiaPPP1R2C →+0.240+4.539<.001.00731
BLOOD_LeukemiaGOLGA6L2 →+0.024+4.705<.001.00331
BLOOD_LeukemiaNPAP1 →+0.057+4.551.004.00431
BLOOD_LeukemiaSLC36A2 →+0.028+4.551<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 178 associations by consensus.

OR2B2 by SLC23A2 expression — SKIN

Box plot of OR2B2 in SLC23A2-low vs SLC23A2-high samples in SKIN.

Explore this box plot interactively →

Exploration