SLC22A9

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC22A9 mutation is significantly associated with the RNA expression of many other genes, with 22 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SLC22A9-associated genes across cancer lineages are OR10Q1, C16orf82, and CD180. Each is linked with SLC22A9 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC22A9-to-partner and partner-to-SLC22A9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR10Q1 grouped by SLC22A9-low versus SLC22A9-high in LUNG_NSCLC_LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC22A9→partner) and Y-score (partner→SLC22A9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADOR10Q1 →+0.060+4.189<.001.00232
LUNG_NSCLC_LUADC16orf82 →+0.007+4.078<.001.00932
LUNG_NSCLC_LUADCD180 →+0.327+3.977<.001.00531
LUNG_NSCLC_LUADSLC36A2 →+0.025+3.760<.001.00831
LUNG_NSCLC_LUADOPTC →+0.027+3.977<.001.00531
LUNG_NSCLC_LUADSPANXN3 →+0.423+3.544<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 22 associations by consensus.

OR10Q1 by SLC22A9 expression — LUNG_NSCLC_LUAD

Box plot of OR10Q1 in SLC22A9-low vs SLC22A9-high samples in LUNG_NSCLC_LUAD.

Explore this box plot interactively →

Exploration