SLC1A5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC1A5 protein abundance is significantly associated with the go_rna of many other GO terms, with 3,593 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLC1A5-associated GO terms across cancer lineages are Symbiont entry into host, Symbiont entry into host cell, and Pyrimidine-containing compound salvage. Each is linked with SLC1A5 in more than 4 cancer types. Because this analysis shows association rather than direction, both SLC1A5-to-partner and partner-to-SLC1A5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Symbiont entry into host grouped by SLC1A5-low versus SLC1A5-high in STOMACH.

protein abundance associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC1A5→partner) and Y-score (partner→SLC1A5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHSymbiont entry into host →-0.127-1.183<.001<.00135
STOMACHSymbiont entry into host cell →-0.127-1.183<.001<.00135
BONEPyrimidine-containing compound salvage →-0.170-1.151<.001.00734
BONEPost-Golgi vesicle-mediated transport →-0.073-1.294.001<.00134
STOMACHSubstrate adhesion-dependent cell spreading →-0.172-1.046<.001<.00134
LUNG_NSCLC_LUADPyrimidine ribonucleotide salvage →-0.071-0.740.005.00325
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,593 associations by consensus.

Symbiont entry into host by SLC1A5 expression — STOMACH

Box plot of Symbiont entry into host in SLC1A5-low vs SLC1A5-high samples in STOMACH.

Explore this box plot interactively →

Exploration