SLC19A3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC19A3 mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC19A3-associated genes across cancer lineages are eIF4E, MSH2, and Myosin-IIa. Each is linked with SLC19A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC19A3-to-partner and partner-to-SLC19A3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by SLC19A3-low versus SLC19A3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC19A3→partner) and Y-score (partner→SLC19A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.162+1.807.024.00432
UCECMSH2 →-0.270-2.674<.001.00532
UCECMyosin-IIa →+0.180+1.933.007.00332
UCECCaspase-7-cleavedD198 →+0.593+2.434.003.00132
UCEC14-3-3_beta →-0.094-2.195.006.00931
UCECERK2 →+0.197+1.514.002.01531
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

eIF4E by SLC19A3 expression — UCEC

Box plot of eIF4E in SLC19A3-low vs SLC19A3-high samples in UCEC.

Explore this box plot interactively →

Exploration