SLC17A7

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC17A7 mutation is significantly associated with the RNA expression of many other genes, with 57 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC17A7-associated genes across cancer lineages are CFAP97D2, OR5P3, and MYOD1. Each is linked with SLC17A7 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC17A7-to-partner and partner-to-SLC17A7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CFAP97D2 grouped by SLC17A7-low versus SLC17A7-high in URINARY_TRACT.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC17A7→partner) and Y-score (partner→SLC17A7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTCFAP97D2 →+0.043+5.087<.001.00432
BLOOD_LeukemiaOR5P3 →+0.081+4.786<.001<.00132
LARGE_INTESTINEMYOD1 →+0.011+2.777<.001.00432
LUNG_NSCLC_LUSCCLRN1 →+0.013+4.643<.001.00831
LUNG_NSCLC_LUSCTMCO5A →+0.060+4.643<.001.00831
LUNG_NSCLC_LUSCOR1L3 →+0.060+4.643<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 57 associations by consensus.

CFAP97D2 by SLC17A7 expression — URINARY_TRACT

Box plot of CFAP97D2 in SLC17A7-low vs SLC17A7-high samples in URINARY_TRACT.

Explore this box plot interactively →

Exploration