SLC16A6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC16A6 mutation is significantly associated with the RNA expression of many other genes, with 1,493 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC16A6-associated genes across cancer lineages are RNU6-552P, RN7SL519P, and BCAR1P2. Each is linked with SLC16A6 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC16A6-to-partner and partner-to-SLC16A6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-552P grouped by SLC16A6-low versus SLC16A6-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC16A6→partner) and Y-score (partner→SLC16A6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCARNU6-552P →+0.488+5.106<.001.00832
PRADRN7SL519P →+0.221+5.807<.001.00332
PRADBCAR1P2 →+0.097+5.166<.001.00732
HNSCOR1A1 →+0.061+5.124<.001.00832
HNSCRNU6-707P →+0.432+6.339<.001.00132
SKCMCYCSP26 →+0.166+6.485<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,493 associations by consensus.

RNU6-552P by SLC16A6 expression — BLCA

Box plot of RNU6-552P in SLC16A6-low vs SLC16A6-high samples in BLCA.

Explore this box plot interactively →

Exploration