SLC16A3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC16A3 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SLC16A3-associated genes across cancer lineages are ASB11, LINGO2, and MAGEB4. Each is linked with SLC16A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC16A3-to-partner and partner-to-SLC16A3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASB11 grouped by SLC16A3-low versus SLC16A3-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC16A3→partner) and Y-score (partner→SLC16A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaASB11 →+0.082+3.007<.001.00731
BLOOD_LeukemiaLINGO2 →+0.622+3.793<.001.00431
LARGE_INTESTINEMAGEB4 →+0.012+5.415.009.00431
SKINKRTAP5-10 →+0.045+3.242<.001.00331
SKINHNRNPCL3 →+0.038+3.376<.001.00231
BREASTOR2G6 →+0.016+5.169<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

ASB11 by SLC16A3 expression — BLOOD_Leukemia

Box plot of ASB11 in SLC16A3-low vs SLC16A3-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration