SLC16A12

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC16A12 mutation is significantly associated with the RNA expression of many other genes, with 278 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC16A12-associated genes across cancer lineages are MIOX, GNPNAT1, and DNASE2. Each is linked with SLC16A12 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC16A12-to-partner and partner-to-SLC16A12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIOX grouped by SLC16A12-low versus SLC16A12-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC16A12→partner) and Y-score (partner→SLC16A12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEMIOX →+0.343+3.502<.001.00131
LARGE_INTESTINEGNPNAT1 →+0.632+2.451<.001.00931
LARGE_INTESTINEDNASE2 →+0.911+3.502.001.00131
LARGE_INTESTINEDPH1 →+0.646+3.321.006.00331
LARGE_INTESTINEKLF3 →+0.778+3.502<.001.00131
LARGE_INTESTINEFAM149A →+1.448+3.252<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 278 associations by consensus.

MIOX by SLC16A12 expression — LARGE_INTESTINE

Box plot of MIOX in SLC16A12-low vs SLC16A12-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration