SLC13A2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC13A2 mutation is significantly associated with the total protein of many other genes, with 54 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC13A2-associated genes across cancer lineages are FASN, MEK1, and Tuberin. Each is linked with SLC13A2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC13A2-to-partner and partner-to-SLC13A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FASN grouped by SLC13A2-low versus SLC13A2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC13A2→partner) and Y-score (partner→SLC13A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFASN →+0.286+1.906.025.01532
UCECMEK1 →+0.349+1.925.003.00432
UCECTuberin →+0.336+2.000<.001<.00132
SKCMMAPK_pT202_Y204 →+0.456+1.584.008.03531
SKCMS6_pS235_S236 →+0.431+1.749.009.04931
UCEC14-3-3_beta →-0.092-2.295.004.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 54 associations by consensus.

FASN by SLC13A2 expression — UCEC

Box plot of FASN in SLC13A2-low vs SLC13A2-high samples in UCEC.

Explore this box plot interactively →

Exploration