SLC10A3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC10A3 mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLC10A3-associated genes across cancer lineages are SCGB3A2, WFDC11, and FABP12. Each is linked with SLC10A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC10A3-to-partner and partner-to-SLC10A3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SCGB3A2 grouped by SLC10A3-low versus SLC10A3-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC10A3→partner) and Y-score (partner→SLC10A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaSCGB3A2 →+0.117+4.922<.001.00931
BLOOD_LeukemiaWFDC11 →+0.041+5.539<.001.00331
BLOOD_LeukemiaFABP12 →+0.085+5.201<.001.00631
BLOOD_LeukemiaGALP →+0.058+5.201<.001.00631
OVARYASB17 →+0.023+5.807<.001.00131
LARGE_INTESTINERSC1A1 →+0.911+3.285<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

SCGB3A2 by SLC10A3 expression — BLOOD_Leukemia

Box plot of SCGB3A2 in SLC10A3-low vs SLC10A3-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration