SLAIN1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLAIN1 RNA expression is significantly associated with the protein abundance of many other proteins, with 18,136 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLAIN1-associated proteins across cancer lineages are SLAIN1_S403, PLOD3, and COLGALT1. Each is linked with SLAIN1 in more than 7 cancer types. Because this analysis shows association rather than direction, both SLAIN1-to-partner and partner-to-SLAIN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLAIN1 versus SLAIN1_S403 in LSCC, with a Pearson correlation of 0.75.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLAIN1→partner) and Y-score (partner→SLAIN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSLAIN1_S403 →+1.074+1.044<.001<.00138
GBMPLOD3 →-0.553-0.914.001<.00136
GBMCOLGALT1 →-0.543-0.855.001<.00136
HNSCTOP2B →+0.403+1.189<.001<.00135
HNSCPLAU →-0.632-0.963<.001<.00135
HNSCPPP1R9A_S840 →+1.377+0.677<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,136 associations by consensus.

SLAIN1 vs SLAIN1_S403 — LSCC

Per-sample scatter of SLAIN1 vs SLAIN1_S403 in LSCC (Pearson r = 0.75).

Explore this scatter interactively →

Exploration