SKA3

Across TCGA patient cohorts, SKA3 mutation is significantly associated with the total protein of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SKA3-associated genes across cancer lineages are eIF4E, Fibronectin, and JNK_pT183_Y185. Each is linked with SKA3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SKA3-to-partner and partner-to-SKA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by SKA3-low versus SKA3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SKA3→partner) and Y-score (partner→SKA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	eIF4E →	+0.174	+1.807	.046	.027	3	1
UCEC	Fibronectin →	-0.340	-3.449	.012	.005	3	1
UCEC	JNK_pT183_Y185 →	-0.220	-3.321	.001	.010	3	1
UCEC	JNK2 →	+0.223	+2.331	.006	.019	3	1
UCEC	Ku80 →	+0.281	+1.820	.003	.016	3	1
UCEC	MEK1 →	+0.392	+3.584	.009	.002	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

eIF4E by SKA3 expression — UCEC

Explore this box plot interactively →