SIX6

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SIX6 RNA expression is significantly associated with the go_rna of many other GO terms, with 664 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible SIX6-associated GO terms across cancer lineages are Positive regulation of monoatomic ion transport, Positive regulation of dendrite morphogenesis, and Positive regulation of cell morphogenesis. Each is linked with SIX6 in more than 5 cancer types. Because this analysis shows association rather than direction, both SIX6-to-partner and partner-to-SIX6 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SIX6→partner) and Y-score (partner→SIX6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaPositive regulation of monoatomic ion transport →-0.057-0.004.003.00136
OESOPHAGUSPositive regulation of dendrite morphogenesis →+0.095+0.005<.001.00235
OESOPHAGUSPositive regulation of cell morphogenesis →+0.098+0.004<.001.00935
BREASTMitochondrial electron transport, ubiquinol to cytochrome c →+0.058+0.016.002.00834
LUNG_SCLCCell adhesion mediated by integrin →-0.143-1.018<.001.00434
OESOPHAGUSMyoblast fusion →-0.136-0.004.005.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 664 associations by consensus.

Exploration