SIRT4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SIRT4 protein abundance is significantly associated with the RNA expression of many other genes, with 302 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible SIRT4-associated genes across cancer lineages are FAH, ARMC1, and EFNB3. Each is linked with SIRT4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SIRT4-to-partner and partner-to-SIRT4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SIRT4 versus FAH in CCRCC, with a Pearson correlation of -0.70.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SIRT4→partner) and Y-score (partner→SIRT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCFAH →-1.007-0.952.006<.00131
CCRCCARMC1 →-0.448-1.187.002<.00131
CCRCCEFNB3 →+0.627+1.218.006<.00131
CCRCCWFS1 →+0.922+1.079.002.00131
CCRCCMGP →+2.260+1.302.001.00231
CCRCCMCM9 →+0.714+1.218.003<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 302 associations by consensus.

SIRT4 vs FAH — CCRCC

Per-sample scatter of SIRT4 vs FAH in CCRCC (Pearson r = -0.70).

Explore this scatter interactively →

Exploration