SHKBP1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SHKBP1 protein abundance is significantly associated with the RNA expression of many other genes, with 4,703 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible SHKBP1-associated genes across cancer lineages are IL2RA, TMEM150B, and FTL. Each is linked with SHKBP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SHKBP1-to-partner and partner-to-SHKBP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SHKBP1 versus IL2RA in CCRCC, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SHKBP1→partner) and Y-score (partner→SHKBP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCIL2RA →+1.024+0.461<.001<.00134
GBMTMEM150B →+0.904+0.432<.001<.00134
CCRCCFTL →+0.598+0.405.001<.00134
GBMCOBL →-1.122-0.377.001.00533
GBMCLEC2B →+0.888+0.334.001<.00133
GBMDSE →+0.817+0.406<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,703 associations by consensus.

SHKBP1 vs IL2RA — CCRCC

Per-sample scatter of SHKBP1 vs IL2RA in CCRCC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration