SHB

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SHB mutation is significantly associated with the total protein of many other genes, with 8 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SHB-associated genes across cancer lineages are eIF4E, Ku80, and MEK1. Each is linked with SHB in more than 1 cancer types. Because this analysis shows association rather than direction, both SHB-to-partner and partner-to-SHB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by SHB-low versus SHB-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SHB→partner) and Y-score (partner→SHB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.192+2.115.037.01931
UCECKu80 →+0.242+2.128.018.01031
UCECMEK1 →+0.443+3.321.005.01031
UCECSETD2 →-0.189-2.115.047.01931
UCECCaspase-7-cleavedD198 →+0.536+2.189.038.03431
UCECCyclin-B1 →+0.494+2.115.044.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

eIF4E by SHB expression — UCEC

Box plot of eIF4E in SHB-low vs SHB-high samples in UCEC.

Explore this box plot interactively →

Exploration