SH3D19

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SH3D19 mutation is significantly associated with the total protein of many other genes, with 50 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SH3D19-associated genes across cancer lineages are eIF4E, PRDX1, and S6_pS240_S244. Each is linked with SH3D19 in more than 1 cancer types. Because this analysis shows association rather than direction, both SH3D19-to-partner and partner-to-SH3D19 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by SH3D19-low versus SH3D19-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SH3D19→partner) and Y-score (partner→SH3D19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.200+2.321.003<.00132
UCECPRDX1 →+0.155+1.502.020.02732
UCECS6_pS240_S244 →+0.275+2.115.036.01732
UCECSTAT3_pY705 →-0.423-1.864<.001.00232
UCECASNS →+0.439+1.847<.001.00732
UCECCaspase-7-cleavedD198 →+0.508+1.341.008.04332
Each partner links to its Q-omics profile. Showing the 6 strongest of 50 associations by consensus.

eIF4E by SH3D19 expression — UCEC

Box plot of eIF4E in SH3D19-low vs SH3D19-high samples in UCEC.

Explore this box plot interactively →

Exploration