SH2D4B

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SH2D4B mutation is significantly associated with the total protein of many other genes, with 43 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SH2D4B-associated genes across cancer lineages are ATM, Bax, and Di-Ras3. Each is linked with SH2D4B in more than 1 cancer types. Because this analysis shows association rather than direction, both SH2D4B-to-partner and partner-to-SH2D4B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by SH2D4B-low versus SH2D4B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SH2D4B→partner) and Y-score (partner→SH2D4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.653-3.794<.001<.00132
UCECBax →+0.201+1.765.025.01432
UCECDi-Ras3 →-0.164-3.906.003<.00132
UCEC14-3-3_beta →-0.089-3.295.017.00931
UCECEGFR_pY1068 →-0.231-2.169.014.00331
UCECA-Raf_pS299 →-0.117-2.459.009.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 43 associations by consensus.

ATM by SH2D4B expression — UCEC

Box plot of ATM in SH2D4B-low vs SH2D4B-high samples in UCEC.

Explore this box plot interactively →

Exploration