SGF29

Across TCGA cell cohorts, SGF29 protein abundance is significantly associated with the RNA expression of many other genes, with 1,969 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible SGF29-associated genes across cancer lineages are LARP6, NOVA2, and PIK3C2G. Each is linked with SGF29 in more than 2 cancer types. Because this analysis shows association rather than direction, both SGF29-to-partner and partner-to-SGF29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SGF29 versus LARP6 in LARGE_INTESTINE, with a Pearson correlation of -0.59.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SGF29→partner) and Y-score (partner→SGF29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	LARP6 →	-2.505	-1.894	.003	.009	3	3
UPPER_AERODIGESTIVE_TRACT	NOVA2 →	+0.029	+0.781	<.001	<.001	3	2
UPPER_AERODIGESTIVE_TRACT	PIK3C2G →	+0.985	+1.019	<.001	<.001	3	2
UPPER_AERODIGESTIVE_TRACT	PCSK1 →	+0.304	+0.745	<.001	.004	3	2
UPPER_AERODIGESTIVE_TRACT	CSRNP3 →	+0.626	+0.652	.001	.004	3	2
UPPER_AERODIGESTIVE_TRACT	SLC2A3 →	+1.931	+0.768	.007	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,969 associations by consensus.

SGF29 vs LARP6 — LARGE_INTESTINE

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