Across TCGA patient cohorts, SGCZ RNA expression is significantly associated with the RNA expression of many other genes, with 11,489 significant associations in total. THYM shows the largest number of these associations.

The most reproducible SGCZ-associated genes across cancer lineages are KCNH5, CDH18, and SLITRK5. Each is linked with SGCZ in more than 14 cancer types. Because this analysis shows association rather than direction, both SGCZ-to-partner and partner-to-SGCZ results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SGCZ→partner) and Y-score (partner→SGCZ) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LGG	KCNH5 →	+0.624	+0.412	<.001	<.001	3	15
LGG	CDH18 →	+0.814	+0.292	<.001	<.001	3	14
THYM	SLITRK5 →	+1.384	+1.380	<.001	<.001	3	14
LGG	CSMD3 →	+0.611	+0.258	<.001	<.001	3	14
THYM	NAP1L2 →	+1.907	+1.317	<.001	<.001	3	13
THYM	BHLHB9 →	+0.981	+1.307	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,489 associations by consensus.

Exploration

SGCZ survival (RNA) · tumor vs normal (RNA) · all SGCZ data types