SF1

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SF1 mass-spec protein differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of SF1’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LSCC), where SF1 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types SF1 is over-expressed in tumor.

LSCC, LUAD, and COAD are the cancer types where SF1 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SF1 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LSCCMaleII,III,IV+0.292<.0019view →
LUADFemaleAll+0.239<.0019view →
COADMaleIII,IV+0.214<.0019view →
HNSCMaleIII,IV+0.166<.0018view →
CCRCCMaleAll+0.094<.0016view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

SF1–LSCC

Tumor-vs-normal mass-spec protein box plot for SF1 in LSCC.

Open the LSCC breakdown →

Exploration