SERPINB3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SERPINB3 mutation is significantly associated with the RNA expression of many other genes, with 1,789 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SERPINB3-associated genes across cancer lineages are TRAIP, DOCK8-AS1, and TEPP. Each is linked with SERPINB3 in more than 2 cancer types. Because this analysis shows association rather than direction, both SERPINB3-to-partner and partner-to-SERPINB3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRAIP grouped by SERPINB3-low versus SERPINB3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SERPINB3→partner) and Y-score (partner→SERPINB3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTRAIP →+0.497+2.906.001.00133
UCECDOCK8-AS1 →-0.331-3.689.009.00133
SKCMTEPP →-0.118-1.649.006.00533
COADTERF1P1 →+0.033+3.321<.001.00832
LUADKLHDC8A →-0.644-3.558.008.00232
LUADDTYMK →+0.504+2.906.003.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,789 associations by consensus.

TRAIP by SERPINB3 expression — UCEC

Box plot of TRAIP in SERPINB3-low vs SERPINB3-high samples in UCEC.

Explore this box plot interactively →

Exploration