SERPINB3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SERPINB3 mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible SERPINB3-associated genes across cancer lineages are SPATA48, ENTHD1, and OR52E8. Each is linked with SERPINB3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SERPINB3-to-partner and partner-to-SERPINB3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SPATA48 grouped by SERPINB3-low versus SERPINB3-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SERPINB3→partner) and Y-score (partner→SERPINB3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCSPATA48 →+0.021+4.169<.001.00131
LUNG_SCLCENTHD1 →+0.159+3.898.003.00531
LUNG_SCLCOR52E8 →+0.032+4.058<.001.00731
LUNG_SCLCSLCO1B7 →+0.259+3.898<.001.00531
LUNG_SCLCMFRP →+0.010+3.898<.001.00531
BLOOD_LymphomaFCN2 →+0.048+4.714<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

SPATA48 by SERPINB3 expression — LUNG_SCLC

Box plot of SPATA48 in SERPINB3-low vs SERPINB3-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration