SERPINA3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SERPINA3 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible SERPINA3-associated genes across cancer lineages are FAM71C, OR1L6, and SPRR1A. Each is linked with SERPINA3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SERPINA3-to-partner and partner-to-SERPINA3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SERPINA3→partner) and Y-score (partner→SERPINA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINFAM71C →+0.018+3.510<.001.00331
LARGE_INTESTINEOR1L6 →+0.022+4.437<.001.00431
BLOOD_LeukemiaSPRR1A →+0.287+5.201<.001.00631
BLOOD_LeukemiaCCDC172 →+0.046+5.201.005.00631
BLOOD_LeukemiaLCE2A →+0.071+5.969<.001.00131
LUNG_NSCLC_LUADOR10C1 →+0.050+5.266<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

Exploration