SENP6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SENP6 mutation is significantly associated with the RNA expression of many other genes, with 143 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SENP6-associated genes across cancer lineages are MTRNR2L1, POU2AF1, and RNF8. Each is linked with SENP6 in more than 1 cancer types. Because this analysis shows association rather than direction, both SENP6-to-partner and partner-to-SENP6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MTRNR2L1 grouped by SENP6-low versus SENP6-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SENP6→partner) and Y-score (partner→SENP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSMTRNR2L1 →+0.104+3.781<.001.00832
LARGE_INTESTINEPOU2AF1 →+0.760+3.125.002.00831
LARGE_INTESTINERNF8 →+0.481+3.212.009.00631
LARGE_INTESTINEMAGEB4 →+0.009+3.192<.001.00231
LARGE_INTESTINECSN2 →+0.016+2.514.002.00731
LARGE_INTESTINESRPK2 →+0.524+3.299.008.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 143 associations by consensus.

MTRNR2L1 by SENP6 expression — CNS

Box plot of MTRNR2L1 in SENP6-low vs SENP6-high samples in CNS.

Explore this box plot interactively →

Exploration