SEMA6D

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SEMA6D RNA expression is significantly associated with the protein abundance of many other proteins, with 18,328 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SEMA6D-associated proteins across cancer lineages are EML1, SARM1, and SEPTIN11. Each is linked with SEMA6D in more than 5 cancer types. Because this analysis shows association rather than direction, both SEMA6D-to-partner and partner-to-SEMA6D results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SEMA6D versus EML1 in BRCA, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SEMA6D→partner) and Y-score (partner→SEMA6D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAEML1 →+0.403+0.802<.001<.00136
LSCCSARM1 →+0.472+1.570<.001.00135
BRCASEPTIN11 →+0.421+0.959<.001.00135
HNSCSIPA1L2_S1244 →+0.759+1.406<.001<.00135
LSCCCRMP1 →+0.707+1.219<.001<.00135
HNSCDTX3 →+0.512+1.730<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,328 associations by consensus.

SEMA6D vs EML1 — BRCA

Per-sample scatter of SEMA6D vs EML1 in BRCA (Pearson r = 0.43).

Explore this scatter interactively →

Exploration